Welcome to BindDB

BindDB is an online resource which allows you to query the Meshorer Lab Epigenomic Feature Database.
Currently BindDB includes ChIP-seq and ChiP-on-chip data for numerous Transcription Factors, Histone Modifications and other proteins, from various mouse cell samples collected from numerous publications and from the experiments performed by the Meshorer lab.
Use this resource to find the full epigenomic profile of any gene or chromosomal area of your choice, or upload a file with a list of your genes / genomic areas of interest.

Please cite BindDB
Livyatan I, Aaronson Y, Gokhman D, Ashkenazi R & Meshorer E (2015)
BindDB: An integrated database and webtool platform for “Reverse-ChIP” epigenomic analysis. Cell Stem Cell, 17(6):647-648

Explore a single area

To explore the epigenomic profile of a single gene or chromosomal area:

Select species Mouse Human
Select database Streamlined Downloaded
Gene figure
Enter a gene name

Which portion of the gene to query?

Chromosomal region (chrN:start-end)

Explore a list of genes / chromosomal areas

(For more information on file formats consult our help page)
Select species Mouse Human
Select database Streamlined Downloaded

File Specifications:
Chromosomal regions (BED format)

Specify a background:

Gene list (gene symbols or BED format)

Which portion of gene to query?

Select background:
All Genes
Custom Gene List